Steffi ROCCHI

Site Hauts du Chazal
UFR Sciences de la Santé
19, rue Ambroise Paré
25000 Besançon, France

Steffi Rocchi

Associate researcher (ASEPT)
PATHOGENES, POLLUTION

steffi.rocchi@-Code to remove to avoid SPAM-univ-fcomte.fr

Mycologie, Résistance aux antifongiques

Ecologue microbienne, je travaille en interaction avec des chercheurs de plusieurs disciplines afin de caractériser les populations de micro-organismes et leur variabilité, et de définir leur degré d’implication dans le développement de pathologies respiratoires. Jusqu’à présent, mes deux thématiques principales de recherche s’intéressaient à la complexité de cette exposition en termes de communautés microbiologiques et de pression de sélection d’origine anthropique. Plus particulièrement, je m’intéresse aux pathologies fongiques infectieuses qui peuvent toucher les populations humaines et animales et travaille sur la résistance aux antimicrobiens.

Journal articles

2023

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Pauline Bellot, François Brischoux, Hélène Budzinski, Sophie Dupont, Clémentine Fritsch, et al.. Chronic exposure to tebuconazole alters thyroid hormones and plumage quality in house sparrows (Passer domesticus). Environmental Science and Pollution Research, 2023, ⟨10.1007/s11356-023-28259-5⟩. ⟨hal-04145278⟩
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https://hal.science/hal-04145278/file/Bellot%20et%20al_Tebuconazole%20thyroid%20hormone%20plumage_2023.pdf BibTex
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Adrien Caillet, Anne-Pauline Bellanger, Jean Christophe Navellou, Etienne Daguindau, Steffi Rocchi, et al.. Refractory invasive pulmonary aspergillosis due to Aspergillus flavus detected with the combination of two in-house Aspergillus qPCR. Journal of Medical Mycology = Journal de Mycologie Médicale, 2023, 33 (1), pp.101350. ⟨10.1016/j.mycmed.2022.101350⟩. ⟨hal-04212333⟩
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https://hal.science/hal-04212333/file/1-s2.0-S115652332200107X-am.pdf BibTex
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Chloé Godeau, Nadia Morin-Crini, Grégorio Crini, Jean-Philippe Guillemin, Anne-Sophie Voisin, et al.. Field-Crop Soils in Eastern France: Coldspots of Azole-Resistant Aspergillus fumigatus. Journal of Fungi, 2023, 9 (6), pp.art. 618. ⟨10.3390/jof9060618⟩. ⟨hal-04165581⟩
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https://hal.inrae.fr/hal-04165581/file/2023-172.pdf BibTex
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Steffi Rocchi, Benoit Valot, Audrey Laboissière, Audrey Guitton, Emeline Scherer, et al.. Development of a cockroach (Blattella germanica) qPCR for the objective measurement of exposure at home. Science of the Total Environment, 2023, 864, pp.160965. ⟨10.1016/j.scitotenv.2022.160965⟩. ⟨hal-04212326⟩
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2022

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Pauline Bellot, François Brischoux, Clémentine Fritsch, Aurélie Goutte, Fabrice Alliot, et al.. Evidence of environmental transfer of tebuconazole to the eggs in the house sparrow (Passer domesticus): An experimental study. Chemosphere, 2022, 308 (3), ⟨10.1016/j.chemosphere.2022.136469⟩. ⟨hal-03781498⟩
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https://hal.science/hal-03781498/file/Bellot%20et%20al_Tebuconazole%20transfer%20eggs_2022.pdf BibTex
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Pauline Bellot, Sophie Marie Dupont, François Brischoux, Hélène Budzinski, Olivier Chastel, et al.. Experimental Exposure to Tebuconazole Affects Metabolism and Body Condition in a Passerine Bird, the House Sparrow ( Passer domesticus ). Environmental Toxicology and Chemistry, 2022, 41 (10), pp.2500-2511. ⟨10.1002/etc.5446⟩. ⟨hal-03774854⟩
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https://hal.science/hal-03774854/file/Bellot%20et%20al_Tebuconazole%20metabo%20sparrow_2022.pdf BibTex
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Laurence Millon, Denis Caillot, Ana Berceanu, Stéphane Bretagne, Fanny Lanternier, et al.. Evaluation of Serum Mucorales Polymerase Chain Reaction (PCR) for the Diagnosis of Mucormycoses: The MODIMUCOR Prospective Trial. Clinical Infectious Diseases, 2022, ⟨10.1093/cid/ciab1066⟩. ⟨hal-03630277⟩
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Laurence Millon, Denis Caillot, Ana Berceanu, Stéphane Bretagne, Fanny Lanternier, et al.. Evaluation of serum Mucorales PCR for the diagnosis of Mucormycoses: The MODIMUCOR prospective trial. Clinical Infectious Diseases, 2022, 75 (5), pp.777-785. ⟨10.1093/cid/ciab1066⟩. ⟨hal-03528144⟩
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2021

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Chloé Godeau, Nadia Morin-Crini, Jean-Noël Staelens, Bernard Martel, Steffi Rocchi, et al.. Adsorption of a triazole antifungal agent, difenoconazole, on soils from a cereal farm: Protective effect of hemp felt. Environmental Technology and Innovation, 2021, 22, pp.101394. ⟨10.1016/j.eti.2021.101394⟩. ⟨hal-03324552⟩
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Chloé Godeau, Nadia Morin-Crini, Éva Fenyvesi, Fatemeh Haghighi, Marc Fourmentin, et al.. Reducing the Unintentional Impact of Triazole Fungicides on Aspergillus fumigatus: Are Cyclodextrins a Solution?. Journal of Environmental Science and Public Health, 2021, 05 (01), pp.114-136. ⟨10.26502/jesph.96120120⟩. ⟨hal-03324561⟩
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Steffi Rocchi, Thomas Sewell, Benoit Valot, Chloé Godeau, Audrey Laboissiere, et al.. Molecular Epidemiology of Azole-Resistant Aspergillus fumigatus in France Shows Patient and Healthcare Links to Environmentally Occurring Genotypes. Frontiers in Cellular and Infection Microbiology, 2021, 11, pp.729476. ⟨10.3389/fcimb.2021.729476⟩. ⟨hal-03529832⟩
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Steffi Rocchi, Chloé Godeau, Emeline Scherer, Gabriel Reboux, Laurence Millon. One year later: The effect of changing azole-treated bulbs for organic tulips bulbs in hospital environment on the azole-resistant Aspergillus fumigatus rate. Medical Mycology, 2021, 59 (7), pp.741-743. ⟨10.1093/mmy/myab007⟩. ⟨hal-03315945⟩
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2020

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Anne-Pauline Bellanger, Steffi Rocchi, Ana Berceanu, Emeline Scherer, Fabrice Larosa, et al.. Positive quantitative PCR detecting Fusarium solani in a case of mixed invasive fungal disease due to Mucorales and Fusarium solani. Bone Marrow Transplantation, 2020, ⟨10.1038/s41409-020-0819-3⟩. ⟨hal-02489421⟩
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Steffi Rocchi, Gabriel Reboux, Emeline Scherer, Audrey Laboissière, Cécile Zaros, et al.. Indoor Microbiome: Quantification of Exposure and Association with Geographical Location, Meteorological Factors, and Land Use in France. Microorganisms, 2020, 8 (3), pp.341. ⟨10.3390/microorganisms8030341⟩. ⟨hal-02543250⟩
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https://hal.science/hal-02543250/file/microorganisms-08-00341-v2.pdf BibTex
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Thibaud Soumagne, Nicolas Roche, Alicia Guillien, Malika Bouhaddi, Steffi Rocchi, et al.. Cardiovascular Risk in COPD Deciphering the Contribution of Tobacco Smoking. Chest, 2020, 157, pp.834 - 845. ⟨10.1016/j.chest.2019.11.002⟩. ⟨hal-03490166⟩
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2019

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Anne-Pauline Bellanger, Gabriel Reboux, Adeline Rouzet, Coralie Barrera, Steffi Rocchi, et al.. Hypersensitivity pneumonitis: A new strategy for serodiagnosis and environmental surveys. Respiratory Medicine, 2019, 150, pp.101-106. ⟨10.1016/j.rmed.2019.02.019⟩. ⟨hal-02307827⟩
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Chloé Godeau, Gabriel Reboux, Emeline Scherer, Audrey Laboissière, Clothilde Léchenault-Bergerot, et al.. Azole-resistant Aspergillus fumigatus in the hospital: Surveillance from flower beds to corridors. American Journal of Infection Control, 2019, ⟨10.1016/j.ajic.2019.10.003⟩. ⟨hal-02543262⟩
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A. Jeanvoine, S. Rocchi, A.P. Bellanger, G. Reboux, L. Millon. Azole-resistant Aspergillus fumigatus: A global phenomenon originating in the environment?. Médecine et Maladies Infectieuses, 2019, ⟨10.1016/j.medmal.2019.07.014⟩. ⟨hal-02280190⟩
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https://hal.science/hal-02280190/file/S0399077X18301768.pdf BibTex
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Clothilde Léchenault-Bergerot, Nadia Morin-Crini, Steffi Rocchi, Eric Lichtfouse, Gilles Chanet, et al.. Hemp to limit diffusion of difenoconazole in vegetable garden soils. Heliyon, 2019, 5 (9), pp.e02392. ⟨10.1016/j.heliyon.2019.e02392⟩. ⟨hal-02277865⟩
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G. Reboux, S. Rocchi, M. Vacheyrou, L. Millon. Identifying indoor air Penicillium species: a challenge for allergic patients. Journal of Medical Microbiology, 2019, 68 (5), pp.812-821. ⟨10.1099/jmm.0.000960⟩. ⟨hal-03734900⟩
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Gabriel Reboux, Benoit B. Valot, Steffi Rocchi, Emeline Scherer, Sandrine Roussel, et al.. Storage mite concentrations are underestimated compared to house dust mite concentrations. Experimental and Applied Acarology, 2019, 77 (4), pp.511-525. ⟨10.1007/s10493-019-00376-2⟩. ⟨hal-02307828⟩
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Steffi Rocchi, Nadia Morin-Crini, Chlothilde Léchenault-Bergerot, Chloé Godeau, Marc Fourmentin, et al.. Effect of the interaction between cyclodextrin and difenoconazole on the growth of mold causing serious fungal infections. Environnement, Risques & Santé, 2019, 18 (5), pp.411-417. ⟨10.1684/ers.2019.1343⟩. ⟨hal-03482882⟩
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Julien Saussereau, Alicia Guillien, Thibaud Soumagne, Jean-Jacques Laplante, Lucie Laurent, et al.. Dietary Patterns and Prevalence of Post-bronchodilator Airway Obstruction in Dairy Farmers Exposed to Organic Dusts. COPD: Journal of Chronic Obstructive Pulmonary Disease, 2019, 16 (2), pp.118-125. ⟨10.1080/15412555.2019.1631775⟩. ⟨hal-02307829⟩
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2018

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Coralie Barrera, Steffi Rocchi, Bruno Degano, Thibaud Soumagne, Lucie Laurent, et al.. Microbial exposure to dairy farmers’ dwellings and COPD occurrence. International Journal of Environmental Health Research, 2018, pp.1-13. ⟨10.1080/09603123.2018.1545900⟩. ⟨hal-01976605⟩
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Anne-Pauline Bellanger, Ana Berceanu, Steffi Rocchi, Benoit Valot, Jean Fontan, et al.. Development of a quantitative PCR detecting Cunninghamella bertholletiae to help in diagnosing this rare and aggressive mucormycosis. Bone Marrow Transplantation, 2018, ⟨10.1038/s41409-018-0194-5⟩. ⟨hal-01791907⟩
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E. Fréalle, Steffi Rocchi, Morgane Bacus, H. Bachelet, Louise Pasquesoone, et al.. Real-time polymerase chain reaction detection of Lichtheimia species in bandages associated with cutaneous mucormycosis in burn patients. Journal of Hospital Infection, 2018, 99 (1), pp.68 - 74. ⟨10.1016/j.jhin.2018.02.004⟩. ⟨hal-01791997⟩
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Souheil Hallit, Benedicte Leynaert, Marie Christine Delmas, Steffi Rocchi, Jacques de Blic, et al.. Correction: Wheezing phenotypes and risk factors in early life: The ELFE cohort. PLoS ONE, 2018, 13 (8), pp.e0201863. ⟨10.1371/journal.pone.0201863⟩. ⟨hal-03529683⟩
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Souheil Hallit, B. Leynaert, M. C. Delmas, S. Rocchi, J. de Blic, et al.. Wheezing phenotypes and risk factors in early life: The ELFE cohort. PLoS ONE, 2018, 13 (4), pp.e0196711. ⟨10.1371/journal.pone.0196711⟩. ⟨hal-03007106⟩
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Gabriel Reboux, Steffi Rocchi, Audrey Laboissière, Habiba Ammari, Martine Bochaton, et al.. Survey of 1012 moldy dwellings by culture fungal analysis: Threshold proposal for asthmatic patient management. Indoor Air, 2018, 29 (1), pp.5-16. ⟨10.1111/ina.12516⟩. ⟨hal-02307826⟩
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Steffi Rocchi, Manon Ponçot, Nadia Morin-Crini, Audrey Laboissière, Benoît Valot, et al.. Determination of azole fungal residues in soils and detection of Aspergillus fumigatus-resistant strains in market gardens of Eastern France. Environmental Science and Pollution Research, 2018, 25 (32), pp.32015-32023. ⟨10.1007/s11356-018-3177-6⟩. ⟨hal-01957023⟩
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Emeline Scherer, Xavier Iriart, Anne-Pauline Bellanger, Damien Dupont, Juliette Guitard, et al.. QPCR detection of Mucorales DNA in bronchoalveolar lavage fluid to diagnose pulmonary mucormycosis. Journal of Clinical Microbiology, 2018, 56 (8), pp.e00289-18. ⟨10.1128/JCM.00289-18⟩. ⟨hal-01818680⟩
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2017

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Nadia Crini, Steffi Rocchi, Audrey Jeanvoine, Célie Garcia, Laurence Millon, et al.. Analysis of Triazole Fungicides in Aqueous Solutions and Their Removal on Modified Activated Carbons. Arabian Journal for Science and Engineering, 2017, 43 (7), pp.3493-3501. ⟨10.1007/s13369-017-2913-4⟩. ⟨hal-01664732⟩
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A. Jeanvoine, S. Rocchi, G. Reboux, N. Crini, G. Crini, et al.. Azole-resistant Aspergillus fumigatus in sawmills of Eastern France. Journal of Applied Microbiology, 2017, 123 (1), pp.172 - 184. ⟨10.1111/jam.13488⟩. ⟨hal-01664748⟩
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Steffi Rocchi, Benoît Valot, Gabriel Reboux, Laurence Millon. DNA metabarcoding to assess indoor fungal communities: Electrostatic dust collectors and Illumina sequencing. Journal of Microbiological Methods, 2017, 139, pp.107 - 112. ⟨10.1016/j.mimet.2017.05.014⟩. ⟨hal-01664751⟩
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S. Rocchi, G. Reboux. Cohortes de naissances européennes : exposition aux micro-organismes et impact sanitaire. Revue des Maladies Respiratoires, 2017, 34 (6), pp.635-644. ⟨10.1016/j.rmr.2016.06.007⟩. ⟨hal-03734832⟩
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2016

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Audrey Jeanvoine, Steffi Rocchi, Gabriel Reboux, Frederic Grenouillet, Mourad Benassarou, et al.. Sinus aspergillosis due to an azole-resistant Aspergillus fumigatus strain carrying the TR34/L98H mutation in immunocompetent host.. Infectious diseases (London, England), 2016, 48 (10), pp.765-6. ⟨hal-01368317⟩
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L. Millon, R. Herbrecht, F. Grenouillet, F. Morio, Alexandre Alanio, et al.. Early diagnosis and monitoring of mucormycosis by detection of circulating DNA in serum: retrospective analysis of 44 cases collected through the French Surveillance Network of Invasive Fungal Infections (RESSIF). Clinical Microbiology and Infection, 2016, 22 (9), pp.810.e1--810.e8. ⟨10.1016/j.cmi.2015.12.006⟩. ⟨pasteur-01405208⟩
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Gabriel Reboux, Steffi Rocchi. Logements des bébés et allergies. Les cahiers de la Recherche : Santé, Environnement, Travail, 2016, Regards sur 10 ans de recherche, le PNR EST de 2006 à 2015, 8, pp.115-116. ⟨anses-01784242⟩
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https://anses.hal.science/anses-01784242/file/2016_CDLR_reboux_rocchi_logements_bebes_allergies.pdf BibTex
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Steffi Rocchi, Maxime Tisserant, Benoit Valot, Audrey Laboissière, Victor Frossard, et al.. Quantification of Saprolegnia parasitica in river water using real-time quantitative PCR: from massive fish mortality to tap drinking water.. International Journal of Environmental Health Research, 2016, pp.1-10. ⟨hal-01397303⟩
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Steffi Rocchi, Bénédicte Richaud-Thiriez, Coralie Barrera, Frédéric Grenouillet, Jean-Charles Dalphin, et al.. Replies to "Is the home environment an important factor in the occurrence of fungal events in cystic fibrosis?". Journal of Cystic Fibrosis, 2016. ⟨hal-01294616⟩
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Emeline Scherer, Benoit Valot, Mallory Vacheyrou, Alexandre Naegele, Jenny Knapp, et al.. Assessment of pets (cats and dogs) in homes using electrostatic dust collectors and QPCR: new tools to evaluate exposure and risk of allergies.. International Journal of Environmental Health Research, 2016, 26 (5-6), pp.1-11. ⟨10.1080/09603123.2016.1217316⟩. ⟨hal-01368313⟩
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2015

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Audrey Jeanvoine, Steffi Rocchi, Gabriel Reboux, Frederic Grenouillet, Morad Benassarou, et al.. Aspergillose sinusienne due à une souche d’Aspergillus fumigatus TR34/L98H résistante aux antifongiques azolés chez un ouvrier du bois. Journal of Medical Mycology = Journal de Mycologie Médicale, 2015, 25 (3), ⟨10.1016/j.mycmed.2015.06.057⟩. ⟨hal-01305517⟩
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Gabriel Reboux, Steffi Rocchi, Victor Frossard, Emeline Scherer, Benoit Valot, et al.. Caractérisation microbiologique de 3193 logements français des enfants de la cohorte ELFE. Journal of Medical Mycology = Journal de Mycologie Médicale, 2015, 25 (3), pp.228. ⟨10.1016/j.mycmed.2015.06.027⟩. ⟨hal-01211279⟩
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S. Rocchi, Gabriel Reboux, V. Frossard, E. Scherer, Benoit Valot, et al.. Microbiological characterization of 3193 French dwellings of Elfe cohort children. Science of the Total Environment, 2015, 505, pp.1026-1035. ⟨10.1016/j.scitotenv.2014.10.086⟩. ⟨hal-01117795⟩
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Steffi Rocchi, Bénédicte Richaud-Thiriez, Coralie Barrera, Frédéric Grenouillet, Jean-Charles Dalphin, et al.. Evaluation of mold exposure in cystic fibrosis patients' dwellings and allergic bronchopulmonary risk.. Journal of Cystic Fibrosis, 2015. ⟨hal-01119477⟩
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2014

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Coralie Barrera, Bénédicte Richaud-Thiriez, Steffi Rocchi, Bénédicte Rognon, Sandrine Roussel, et al.. New Commercially Available IgG Kits and Time-Resolved Fluorometric IgE Assay for Diagnosis of Allergic Bronchopulmonary Aspergillosis in Patients with Cystic Fibrosis.. Clinical and Vaccine Immunology, 2014, 23 (3), pp.196-203. ⟨hal-01294619⟩
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Steffi Rocchi, Etienne Daguindau, Frédéric Grenouillet, Eric Deconinck, Anne-Pauline Bellanger, et al.. Azole-resistant Aspergillus fumigatus isolate with the TR34/L98H mutation in both a fungicide-sprayed field and the lung of a hematopoietic stem cell transplant recipient with invasive aspergillosis.. Journal of Clinical Microbiology, 2014, 52 (5), pp.1724-6. ⟨10.1128/JCM.03182-13⟩. ⟨hal-01063888⟩
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Steffi Rocchi, Gabriel Reboux. Modèle expérimental invertébré et bioluminescence : de nouvelles voies pour accroître l’efficience de l’expérimentation animale. Bulletin de veille scientifique , 2014, 24, pp.54-58. ⟨hal-01119472⟩
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S. Rocchi, G. Reboux, F. Larosa, E. Scherer, E. Daguindeau, et al.. Evaluation of invasive aspergillosis risk of immunocompromised patients alternatively hospitalized in hematology intensive care unit and at home.. Indoor Air, 2014, epub ahead of print. ⟨10.1111/ina.12108⟩. ⟨hal-01063887⟩
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2013

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Laurence Millon, Fabrice Larosa, Quentin Lepiller, Faezeh Legrand, Steffi Rocchi, et al.. Quantitative polymerase chain reaction detection of circulating DNA in serum for early diagnosis of mucormycosis in immunocompromised patients.. Clinical Infectious Diseases, 2013, 56 (10), pp.e95-101. ⟨10.1093/cid/cit094⟩. ⟨hal-01061552⟩
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G. Reboux, S. Rocchi, L. Millon, D. Talon, X. Bertrand. [Fungal and bacterial contamination of 30 general practitioners' consultation room in Franche-Comté (eastern France)].. J Mycol Med, 2013, 23 (3), pp.149-54. ⟨10.1016/j.mycmed.2013.05.001⟩. ⟨hal-00926046⟩
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Emeline Scherer, Steffi Rocchi, Gabriel Reboux, Stéphanie Vandentorren, Sandrine Roussel, et al.. qPCR standard operating procedure for measuring microorganisms in dust from dwellings in large cohort studies.. Science of the Total Environment, 2013, 466-467C, pp.716-724. ⟨10.1016/j.scitotenv.2013.07.054⟩. ⟨hal-00879495⟩
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Scientific blog post

2019

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Steffi Rocchi, Laurence Millon, Nadia Crini, Grégorio Crini. Utilisation des fongicides triazolés : impact non intentionnel sur une moisissure pathogène pour l’Homme. Fiche thématique N°20 – Réseau Ecotox. 2019, 4 p. ⟨hal-02791031⟩
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Conference papers

2019

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S. Rocchi, Carlo Mengoli, P. White, R. Barnes, J.P. Donnelly, et al.. An inter-laboratory multi-centre evaluation of the performance of Mucorales PCR assays when testing serum specimens: A study by the ISHAM Fungal PCR Initiative and the ModiMucor study group -FPCRI Mucor Laboratory Working group. 9th Trends in Medical Mycology, Oct 2019, Nice, France. pp.P164. ⟨hal-04164225⟩
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Book sections

2021

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Steffi Rocchi, Chloé Godeau, Grégorio Crini, Eveline Snelders. Emergence of a Pathogenic Fungus Resistant to Triazole Antifungal Drugs. Emerging Contaminants Vol. 1, 65, Springer International Publishing, pp.165-206, 2021, Environmental Chemistry for a Sustainable World, ⟨10.1007/978-3-030-69079-3_3⟩. ⟨hal-04286384⟩
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Theses

2014

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Steffi Rocchi. Relations entre profils microbiologiques de l'environnement intérieur et maladies respiratoires infectieuses et allergiques. Médecine humaine et pathologie. Université de Franche-Comté, 2014. Français. ⟨NNT : 2014BESA3008⟩. ⟨tel-01213960⟩
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